Ancestral genome of c__Clostridia

with 53 descendant species and 15653 (2925 well supported) ancestral genes (HOGs).

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Common name:c__Clostridia
Taxonomic identifier:-1003375248
Number of ancestral genes:15653 (all HOGs)
2925 (well supported HOGs ?)
Number of ancestral genes included in ancestral contigs:8323
Number of descendant extant species:53
Descendant extant species
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Code
Scientific Name
Common Name
Last Update
# of Sequences
Taxon Id
D.
RUMCH Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) 2009-May-26 3286 -416163131 B
ACET2 Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) 2007-May-03 3102 -1436795047 B
ACET1 Acetivibrio thermocellus (strain DSM 1313 / LMG 6656 / LQ8) 2011-May-30 2881 -1003781903 B
ACECE Acetivibrio clariflavus (strain DSM 19732 / NBRC 101661 / EBR45) 2014-Oct-02 3771 -823481299 B
OSCVS Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) 2015-Nov-05 4580 -505385989 B
RUMA7 Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) 2015-Jun-16 3770 -1287565386 B
RUMC1 Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13) 2015-Nov-05 2114 -991366057 B
CLOS4 Clostridium sp. (strain ATCC 29733 / VPI C48-50) 2019-Aug-11 3692 -324514695 B
ETHHY Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) 2012-Nov-15 2663 -117497960 B
MAGIU Mageeibacillus indolicus (strain UPII9-5) 2012-Dec-17 1566 -1875823293 B
CLOP1 Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) 2006-Oct-17 2873 -1856040578 B
CLOPE Clostridium perfringens (strain 13 / Type A) 2009-Sep-16 2722 -491071389 B
CLOPS Clostridium perfringens (strain SM101 / Type A) 2006-Oct-17 2566 -322245329 B
CLOC7 Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) 2012-Nov-29 4209 -1976781859 B
CLOLD Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) 2012-Dec-17 4149 -2031138838 B
CLOK5 Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) 2008-Mar-24 3823 -1428311909 B
CLOBJ Clostridium botulinum (strain Kyoto / Type A2) 2010-Feb-12 3860 -1939197884 B
CLOB1 Clostridium botulinum (strain ATCC 19397 / Type A) 2007-Oct-25 3547 -1935129970 B
CLOBL Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) 2007-Oct-25 3633 -1848720965 B
CLOBH Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) 2007-Oct-25 3669 -1568846809 B
CLOBK Clostridium botulinum (strain Okra / Type B1) 2008-Jul-13 3850 -1531241774 B
CLOB6 Clostridium botulinum (strain 657 / Type Ba4) 2010-May-24 3977 -1351315437 B
CLOB2 Clostridium botulinum (strain 230613 / Type F) 2013-May-28 3525 -765600468 B
CLOBM Clostridium botulinum (strain Loch Maree / Type A3) 2008-Jul-13 3982 -447569635 B
CLOB0 Clostridium botulinum (strain H04402 065 / Type A5) 2013-Dec-17 3688 -353318668 B
CLONN Clostridium novyi (strain NT) 2007-Mar-07 2305 -1743554864 B
CLOAE Clostridium acetobutylicum (strain EA 2018) 2012-Feb-09 3912 -1199735043 B
CLOAB Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) 2010-Mar-21 3849 -270097068 B
ARTSS Arthromitus sp. (strain SFB-mouse-Japan) 2014-Nov-05 1509 -932741692 B
CLOB8 Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) 2008-Mar-24 5003 -1981129209 B
CLOBB Clostridium botulinum (strain Eklund 17B / Type B) 2008-Sep-09 3525 -1776341304 B
CLOBA Clostridium botulinum (strain Alaska E43 / Type E3) 2008-Sep-09 3253 -238881886 B
CLOTE Clostridium tetani (strain Massachusetts / E88) 2010-Mar-21 2414 -740289686 B
ACEWD Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) 2012-Dec-17 3444 -1479437726 B
ALKOO Alkaliphilus oremlandii (strain OhILAs) 2008-Feb-07 2828 -668705863 B
ALKMQ Alkaliphilus metalliredigens (strain QYMF) 2008-Feb-07 4463 -142649041 B
FILAD Filifactor alocis (strain ATCC 35896 / D40 B5) 2012-Jan-25 1614 -1559280640 B
ACESD Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / CCUG 9281 / NCIMB 10654 / HF) 2013-Aug-19 2572 -1127706318 B
CLOD6 Clostridioides difficile (strain 630) 2014-Jun-18 3862 -1063177255 B
CLODR Clostridioides difficile (strain R20291) 2014-Jun-18 3542 -90307504 B
GOTA9 Gottschalkia acidurici (strain ATCC 7906 / DSM 604 / BCRC 14475 / CIP 104303 / KCTC 5404 / NCIMB 10678 / 9a) 2014-Nov-05 2838 -2031077502 B
FINM2 Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) 2008-Jul-13 1813 -704911769 B
ANAPD Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / NCTC 11806 / PC1) 2009-Nov-22 1795 -660439204 B
CELLD Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) 2015-Nov-26 4149 -861769559 B
LACE2 Lachnospira eligens (strain ATCC 27750 / DSM 3376 / VPI C15-48 / C15-B4) 2009-Nov-22 2761 -2125443666 B
BUTPB Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) 2012-Jan-19 3799 -1496538867 B
LACP7 Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) 2008-Mar-24 3889 -1404994984 B
CLOSS Clostridium sp. (strain SY8519) 2014-Nov-05 2598 -1263461042 B
AGARV Agathobacter rectalis (strain ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990) 2010-May-24 3542 -1140930106 B
LACSW Lacrimispora saccharolytica (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) 2013-Jan-10 4132 -506242731 B
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