with 53 descendant species and 15653 (2925 well supported) ancestral genes (HOGs).
Common name: | c__Clostridia |
Taxonomic identifier: | -1003375248 |
Number of ancestral genes: | 15653 (all HOGs) 2925 (well supported HOGs ?) |
Number of ancestral genes included in ancestral contigs: | 8323 |
Number of descendant extant species: | 53 |
Code | Scientific Name | Common Name | Last Update | # of Sequences | Taxon Id | D. |
---|---|---|---|---|---|---|
RUMCH | Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) | 2009-May-26 | 3286 | -416163131 | B | |
ACET2 | Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) | 2007-May-03 | 3102 | -1436795047 | B | |
ACET1 | Acetivibrio thermocellus (strain DSM 1313 / LMG 6656 / LQ8) | 2011-May-30 | 2881 | -1003781903 | B | |
ACECE | Acetivibrio clariflavus (strain DSM 19732 / NBRC 101661 / EBR45) | 2014-Oct-02 | 3771 | -823481299 | B | |
OSCVS | Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) | 2015-Nov-05 | 4580 | -505385989 | B | |
RUMA7 | Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) | 2015-Jun-16 | 3770 | -1287565386 | B | |
RUMC1 | Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13) | 2015-Nov-05 | 2114 | -991366057 | B | |
CLOS4 | Clostridium sp. (strain ATCC 29733 / VPI C48-50) | 2019-Aug-11 | 3692 | -324514695 | B | |
ETHHY | Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) | 2012-Nov-15 | 2663 | -117497960 | B | |
MAGIU | Mageeibacillus indolicus (strain UPII9-5) | 2012-Dec-17 | 1566 | -1875823293 | B | |
CLOP1 | Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) | 2006-Oct-17 | 2873 | -1856040578 | B | |
CLOPE | Clostridium perfringens (strain 13 / Type A) | 2009-Sep-16 | 2722 | -491071389 | B | |
CLOPS | Clostridium perfringens (strain SM101 / Type A) | 2006-Oct-17 | 2566 | -322245329 | B | |
CLOC7 | Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) | 2012-Nov-29 | 4209 | -1976781859 | B | |
CLOLD | Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) | 2012-Dec-17 | 4149 | -2031138838 | B | |
CLOK5 | Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) | 2008-Mar-24 | 3823 | -1428311909 | B | |
CLOBJ | Clostridium botulinum (strain Kyoto / Type A2) | 2010-Feb-12 | 3860 | -1939197884 | B | |
CLOB1 | Clostridium botulinum (strain ATCC 19397 / Type A) | 2007-Oct-25 | 3547 | -1935129970 | B | |
CLOBL | Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) | 2007-Oct-25 | 3633 | -1848720965 | B | |
CLOBH | Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) | 2007-Oct-25 | 3669 | -1568846809 | B | |
CLOBK | Clostridium botulinum (strain Okra / Type B1) | 2008-Jul-13 | 3850 | -1531241774 | B | |
CLOB6 | Clostridium botulinum (strain 657 / Type Ba4) | 2010-May-24 | 3977 | -1351315437 | B | |
CLOB2 | Clostridium botulinum (strain 230613 / Type F) | 2013-May-28 | 3525 | -765600468 | B | |
CLOBM | Clostridium botulinum (strain Loch Maree / Type A3) | 2008-Jul-13 | 3982 | -447569635 | B | |
CLOB0 | Clostridium botulinum (strain H04402 065 / Type A5) | 2013-Dec-17 | 3688 | -353318668 | B | |
CLONN | Clostridium novyi (strain NT) | 2007-Mar-07 | 2305 | -1743554864 | B | |
CLOAE | Clostridium acetobutylicum (strain EA 2018) | 2012-Feb-09 | 3912 | -1199735043 | B | |
CLOAB | Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) | 2010-Mar-21 | 3849 | -270097068 | B | |
ARTSS | Arthromitus sp. (strain SFB-mouse-Japan) | 2014-Nov-05 | 1509 | -932741692 | B | |
CLOB8 | Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) | 2008-Mar-24 | 5003 | -1981129209 | B | |
CLOBB | Clostridium botulinum (strain Eklund 17B / Type B) | 2008-Sep-09 | 3525 | -1776341304 | B | |
CLOBA | Clostridium botulinum (strain Alaska E43 / Type E3) | 2008-Sep-09 | 3253 | -238881886 | B | |
CLOTE | Clostridium tetani (strain Massachusetts / E88) | 2010-Mar-21 | 2414 | -740289686 | B | |
ACEWD | Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) | 2012-Dec-17 | 3444 | -1479437726 | B | |
ALKOO | Alkaliphilus oremlandii (strain OhILAs) | 2008-Feb-07 | 2828 | -668705863 | B | |
ALKMQ | Alkaliphilus metalliredigens (strain QYMF) | 2008-Feb-07 | 4463 | -142649041 | B | |
FILAD | Filifactor alocis (strain ATCC 35896 / D40 B5) | 2012-Jan-25 | 1614 | -1559280640 | B | |
ACESD | Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / CCUG 9281 / NCIMB 10654 / HF) | 2013-Aug-19 | 2572 | -1127706318 | B | |
CLOD6 | Clostridioides difficile (strain 630) | 2014-Jun-18 | 3862 | -1063177255 | B | |
CLODR | Clostridioides difficile (strain R20291) | 2014-Jun-18 | 3542 | -90307504 | B | |
GOTA9 | Gottschalkia acidurici (strain ATCC 7906 / DSM 604 / BCRC 14475 / CIP 104303 / KCTC 5404 / NCIMB 10678 / 9a) | 2014-Nov-05 | 2838 | -2031077502 | B | |
FINM2 | Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) | 2008-Jul-13 | 1813 | -704911769 | B | |
ANAPD | Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / NCTC 11806 / PC1) | 2009-Nov-22 | 1795 | -660439204 | B | |
CELLD | Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) | 2015-Nov-26 | 4149 | -861769559 | B | |
LACE2 | Lachnospira eligens (strain ATCC 27750 / DSM 3376 / VPI C15-48 / C15-B4) | 2009-Nov-22 | 2761 | -2125443666 | B | |
BUTPB | Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) | 2012-Jan-19 | 3799 | -1496538867 | B | |
LACP7 | Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) | 2008-Mar-24 | 3889 | -1404994984 | B | |
CLOSS | Clostridium sp. (strain SY8519) | 2014-Nov-05 | 2598 | -1263461042 | B | |
AGARV | Agathobacter rectalis (strain ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990) | 2010-May-24 | 3542 | -1140930106 | B | |
LACSW | Lacrimispora saccharolytica (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) | 2013-Jan-10 | 4132 | -506242731 | B |