with 72 descendant species and 16228 (2739 well supported) ancestral genes (HOGs).
Common name: | p__Firmicutes_A |
Taxonomic identifier: | -919058606 |
Number of ancestral genes: | 16228 (all HOGs) 2739 (well supported HOGs ?) |
Number of ancestral genes included in ancestral contigs: | 9380 |
Number of descendant extant species: | 72 |
Code | Scientific Name | Common Name | Last Update | # of Sequences | Taxon Id | D. |
---|---|---|---|---|---|---|
THETC | Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIMB 9385 / NCA 3814 / NCTC 13789 / WDCM 00135 / 2032) | 2014-Nov-05 | 2583 | -1729692936 | B | |
THEXL | Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) | 2014-Nov-05 | 2318 | -894961175 | B | |
THESW | Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) | 2012-Dec-17 | 2777 | -137990564 | B | |
THEIA | Thermoanaerobacter italicus (strain DSM 9252 / Ab9) | 2012-Jan-19 | 2239 | -1410080586 | B | |
THEM3 | Thermoanaerobacter mathranii subsp. mathranii (strain DSM 11426 / CCUG 53645 / CIP 108742 / A3) | 2011-May-30 | 2158 | -1222171728 | B | |
THEPX | Thermoanaerobacter sp. (strain X514) | 2008-Jul-13 | 2322 | -1699269478 | B | |
THESX | Thermoanaerobacter sp. (strain X513) | 2012-Apr-01 | 2307 | -1415966469 | B | |
THEP3 | Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) | 2008-Jul-13 | 2192 | -326914700 | B | |
CALS4 | Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) | 2010-Mar-21 | 2547 | -491421196 | B | |
CALOW | Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) | 2011-Oct-02 | 2132 | -2010289916 | B | |
CALS8 | Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) | 2007-Oct-25 | 2619 | -2006840310 | B | |
CALKI | Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) | 2014-Nov-05 | 2462 | -1939916421 | B | |
CALBD | Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) | 2014-Jun-18 | 2648 | -1449962728 | B | |
CALH1 | Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) | 2012-Apr-01 | 2521 | -1303012013 | B | |
CALK2 | Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) | 2014-Nov-05 | 2460 | -1266731129 | B | |
CALOO | Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) | 2012-Apr-01 | 2184 | -980378000 | B | |
TEPAE | Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) | 2014-Jan-25 | 2761 | -1539053530 | B | |
THEOJ | Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) | 2013-Jan-10 | 2151 | -1189467062 | B | |
RUMCH | Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) | 2009-May-26 | 3286 | -416163131 | B | |
ACET2 | Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) | 2007-May-03 | 3102 | -1436795047 | B | |
ACET1 | Acetivibrio thermocellus (strain DSM 1313 / LMG 6656 / LQ8) | 2011-May-30 | 2881 | -1003781903 | B | |
ACECE | Acetivibrio clariflavus (strain DSM 19732 / NBRC 101661 / EBR45) | 2014-Oct-02 | 3771 | -823481299 | B | |
OSCVS | Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) | 2015-Nov-05 | 4580 | -505385989 | B | |
RUMA7 | Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) | 2015-Jun-16 | 3770 | -1287565386 | B | |
RUMC1 | Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13) | 2015-Nov-05 | 2114 | -991366057 | B | |
CLOS4 | Clostridium sp. (strain ATCC 29733 / VPI C48-50) | 2019-Aug-11 | 3692 | -324514695 | B | |
ETHHY | Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) | 2012-Nov-15 | 2663 | -117497960 | B | |
MAGIU | Mageeibacillus indolicus (strain UPII9-5) | 2012-Dec-17 | 1566 | -1875823293 | B | |
CLOP1 | Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) | 2006-Oct-17 | 2873 | -1856040578 | B | |
CLOPE | Clostridium perfringens (strain 13 / Type A) | 2009-Sep-16 | 2722 | -491071389 | B | |
CLOPS | Clostridium perfringens (strain SM101 / Type A) | 2006-Oct-17 | 2566 | -322245329 | B | |
CLOC7 | Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) | 2012-Nov-29 | 4209 | -1976781859 | B | |
CLOLD | Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) | 2012-Dec-17 | 4149 | -2031138838 | B | |
CLOK5 | Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) | 2008-Mar-24 | 3823 | -1428311909 | B | |
CLOBJ | Clostridium botulinum (strain Kyoto / Type A2) | 2010-Feb-12 | 3860 | -1939197884 | B | |
CLOB1 | Clostridium botulinum (strain ATCC 19397 / Type A) | 2007-Oct-25 | 3547 | -1935129970 | B | |
CLOBL | Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) | 2007-Oct-25 | 3633 | -1848720965 | B | |
CLOBH | Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) | 2007-Oct-25 | 3669 | -1568846809 | B | |
CLOBK | Clostridium botulinum (strain Okra / Type B1) | 2008-Jul-13 | 3850 | -1531241774 | B | |
CLOB6 | Clostridium botulinum (strain 657 / Type Ba4) | 2010-May-24 | 3977 | -1351315437 | B | |
CLOB2 | Clostridium botulinum (strain 230613 / Type F) | 2013-May-28 | 3525 | -765600468 | B | |
CLOBM | Clostridium botulinum (strain Loch Maree / Type A3) | 2008-Jul-13 | 3982 | -447569635 | B | |
CLOB0 | Clostridium botulinum (strain H04402 065 / Type A5) | 2013-Dec-17 | 3688 | -353318668 | B | |
CLONN | Clostridium novyi (strain NT) | 2007-Mar-07 | 2305 | -1743554864 | B | |
CLOAE | Clostridium acetobutylicum (strain EA 2018) | 2012-Feb-09 | 3912 | -1199735043 | B | |
CLOAB | Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) | 2010-Mar-21 | 3849 | -270097068 | B | |
ARTSS | Arthromitus sp. (strain SFB-mouse-Japan) | 2014-Nov-05 | 1509 | -932741692 | B | |
CLOB8 | Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) | 2008-Mar-24 | 5003 | -1981129209 | B | |
CLOBB | Clostridium botulinum (strain Eklund 17B / Type B) | 2008-Sep-09 | 3525 | -1776341304 | B | |
CLOBA | Clostridium botulinum (strain Alaska E43 / Type E3) | 2008-Sep-09 | 3253 | -238881886 | B |