Related genomes of genome UC094 based on shared OMA groups

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

UC094 - candidate division WWE3 bacterium W9_Combined_metabat1_117

Proteome version: Genbank; ASM1333509v1; GCA_013335095.1; 11-JUN-2020 with 1309 proteins.

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Genome information
Chromosome viewer
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	UC171	candidate division CPR3 bacterium GWF2_35_18 none	259
2	UC061	Candidatus Roizmanbacteria bacterium Kalu_18-Q3-R12-55_MAXAC.194_uni	237
3	UC184	candidate division WWE3 bacterium RAAC2_WWE3_1	235
4	KTERU	Ktedonosporobacter rubrisoli	228
5	CHLAA	Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)	228
6	CHLSY	Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)	226
7	SPHTD	Sphaerobacter thermophilus (strain DSM 20745 / S 6022)	215
8	HYDET	Hydrogenispora ethanolica	214
9	BACT0	Bacillus thuringiensis subsp. finitimus (strain YBT-020)	214
10	ROSS1	Roseiflexus sp. (strain RS-1)	213

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	TRYCI	Trypanosoma congolense (strain IL3000)	6
2	RALSL	Ralstonia solanacearum	6
3	MONPE	Moniliophthora perniciosa (strain FA553 / isolate CP02)	6
4	VITCO	Vittaforma corneae (strain ATCC 50505)	10
5	TRAHO	Trachipleistophora hominis	11
6	EDHAE	Edhazardia aedis (strain USNM 41457)	11
7	NEMP3	Nematocida parisii (strain ERTm3)	13
8	ENTBH	Enterocytozoon bieneusi (strain H348)	13
9	POSPM	Postia placenta (strain ATCC 44394 / Madison 698-R)	14
10	NANGC	Nannochloropsis gaditana (strain CCMP526)	14