Related genomes of genome NANST based on shared OMA groups

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

NANST - Nanobsidianus stetteri

Proteome version: Ensembl Bacteria 44; Nst1 with 647 proteins.

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Genome information
Chromosome viewer
List genes
Related Species

Based on number of:

Shared OMA groups

Shared HOGs
Synteny

Species with most common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	SULIY	Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)	176
2	NANEQ	Nanoarchaeum equitans (strain Kin4-M)	176
3	THESM	Thermococcus sibiricus (strain DSM 12597 / MM 739)	173
4	PYRFU	Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)	173
5	THEBM	Thermococcus barophilus (strain DSM 11836 / MP)	172
6	SULIK	Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)	170
7	VULM7	Vulcanisaeta moutnovskia (strain 768-28)	170
8	THEON	Thermococcus onnurineus (strain NA1)	170
9	SULIM	Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)	170
10	SULID	Sulfolobus islandicus (strain L.D.8.5 / Lassen #2)	170

Species with least common OMA groups

Nb.	OMA Group	Scientific Name	Nb. orthologous group
1	RALSL	Ralstonia solanacearum	1
2	MONPE	Moniliophthora perniciosa (strain FA553 / isolate CP02)	7
3	SULMC	Sulcia muelleri (strain CARI)	11
4	ZINIC	Zinderia insecticola (strain CARI)	11
5	UC087	Candidatus Pacebacteria bacterium LF-bin-483	12
6	NANGC	Nannochloropsis gaditana (strain CCMP526)	13
7	MEGSC	Megaselia scalaris	13
8	TRYCI	Trypanosoma congolense (strain IL3000)	14
9	UC053	Candidatus Omnitrophica bacterium BS750m-G34	14
10	MYCCR	Mycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147)	14